ABSTRACT
The COVID-19 pandemic increased the pollution of water resources by some contaminants, e.g., chloroquine (CQN), due to its probable benefit in the treatment of the virus. Thus, is necessary the removal of CQN from water through advanced techniques. Black soybeans have been widely used due to their benefits to human health, and as a result, there was an increase in soybean husk residue, the main by-product of the soybean processing industry. Given the current scenario and the need to develop new uses for this agricultural residue, this study aimed to establish an economical and environmental biotechnology by the CQN adsorption process onto black soybean hulls (BSH) for the first time. BSH was characterized by physicochemical and spectroscopic techniques that demonstrated porosity, organic functional groups and negative surface charges. The pH study did not affect CQN adsorption pronouncedly, indicating that π-interactions and hydrogen bonds are the main mechanisms of the adsorption process. The maximum adsorption capacity was 75.06 ± 2.24 mg g−1 with 240 min of contact time at 288 K. In order to verify the biosorbent applicability, the safranin orange dye and triclosan adsorption were also evaluated onto BSH. The absorption peaks of the contaminants used in the synthetic mixture demonstrated a removal rate of 90.81 ± 0.80% for safranin orange, 66.79 ± 1.12% for triclosan and 70.62 ± 0.67% for CQN. The satisfactory removal of other contaminants indicates that BSH is a promising, affordable and environmentally friendly biosorbent with applicability potential for alternative treatment of contaminated water. © 2023 Taylor & Francis Group, LLC.
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In this study, we report a one-pot, green, cost-efficient, and fast synthesis of plant-based sulfur and nitrogen self-co-doped carbon quantum dots (S,N-CQDs). By 4-min microwave treatment of onion and cabbage juices as renewable, cheap, and green carbon sources and self-passivation agents, blue emissive S,N-CQDs have been synthesized (λex/λem of 340/418 nm) with a fluorescence quantum yield of 15.2%. A full characterization of the natural biomass-derived quantum dots proved the self-doping with nitrogen and sulfur. The S,N-CQDs showed high efficiency as a fluorescence probe for sensitive determination of nitazoxanide (NTZ), that recently found wide applicability as a repurposed drug for COVID-19, over the concentration range of 0.25–50.0 μM with LOD of 0.07 μM. The nanoprobe has been successfully applied for NTZ determination in pharmaceutical samples with excellent % recovery of 98.14 ± 0.42. Furthermore, the S,N-CQDs proved excellent performance as a sensitive fluorescence nanoprobe for determination of hemoglobin (Hb) over the concentration range of 36.3–907.5 nM with a minimum detectability of 10.30 nM. The probe has been applied for the determination of Hb in blood samples showing excellent agreement with the results documented by a medical laboratory. The greenness of the developed probe has been positively investigated by different greenness metrics and software. The green character of the proposed analytical methods originates from the synthesis of S,N-CQDs from sustainable, widely available, and cheap plants via low energy/low cost microwave-assisted technique. Omission of organic solvents and harsh chemicals beside dependence on mix-and-read analytical approach corroborate the method greenness. The obtained results demonstrated the substantial potential of the synthesized green, safe, cheap, and sustainable S,N-CQDs for pharmaceutical and biological applications. © 2022 Elsevier B.V.
ABSTRACT
TRCReady® SARS-CoV-2 i is a reagent for transcription-reverse transcription concerted reaction (TRC) to detect SARS-CoV-2 N2 gene, used with the automated rapid isothermal nucleic acid amplification test (NAAT) analyzer TRCReady®-80. Sensitivity and specificity of TRCReady® SARS-CoV-2 i was assessed by comparison with the results of real-time reverse transcription-polymerase chain reaction (RT-PCR) using nasopharyngeal swab samples. From November 2020 to March 2021, a total of 441 nasopharyngeal swabs were obtained and analyzed both with TRCReady® SARS-CoV-2 i and RT-PCR. Sensitivity and specificity of TRCReady® SARS-CoV-2 i were 94.6% (53/56) and 99.2% (382/385), respectively. Reaction time to positivity of TRCReady® SARS-CoV-2 i ranged from 1.166 to 9.805 (median: 2.887) min, and minimum detection sensitivity of TRCReady® SARS-CoV-2 i was 9 copies per test, with reaction time as 5.014 min. Detection of SARS-CoV-2 gene from nasopharyngeal swab sample using TRCReady® SARS-CoV-2 i shows comparative diagnostic test accuracy with RT-PCR, and can be used as a useful test to diagnose SARS-CoV-2 infection. © 2022 Japanese Society of Chemotherapy and The Japanese Association for Infectious Diseases
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Cationic surfactants have gained significant interest since their introduction. Their properties and adsorption behavior onto different surfaces have driven the development of a plethora of surfactants with distinctive functionalities. This paper reviews self-assembly, intermolecular interactions, and the properties of cationic surfactants also when interacting with co-solutes, which may be small molecules or macromolecules, and surfaces. The versatile properties of single- and double-chain cationic surfactants and other special cationics such as gemini, catanionic, bolaform, amino acid- and sugar-based surfactants, are presented and discussed together with skin toxicity and environmental considerations. The effects of cationic surfactant mixing with other surfactants, polymers, proteins, and DNA are also shown and examined. We also outline established applications of cationic surfactants as disinfectants, in fabric softening, hard surface cleaning, personal care applications, road surfacing, and oil field applications, as well as emerging applications such as soft antimicrobial agents and nucleic acid delivery, which has contributed, for instance, to the enormously successful surfactant-based mRNA COVID-19 vaccines. © 2023 Elsevier B.V.
ABSTRACT
Exposure of polymers to temperature, atmospheric oxygen, or even light could result in some degradation of the polymer properties and features during processing (application), storage and end use. In hydrocarbon polymers, the polymer tend to free radical formation, eventually resulting in chain damage or crosslinking that leads to degradation. Antioxidants are used to terminate these chain reactions by removing radicals. Antioxidants are used in most hydrocarbon polymers including, polypropylene. a good addiction package must be existed to overcome the effect of degradation and save the polymer shape and characteristics. The practical experiment was carried out on a pure polypropylene (intermediate polypropylene resin without additives) and another practical experiment but with adding several types of additives with a certain concentration and study the behavior of polypropylene in all cases with successive extrusions. On other hand Flexible molecular docking on heme oxy-genase, an important stress protein that is involved in cellular protection, antioxidant and anti-inflammatory activities, justified the antioxidant activity of the isolated compounds. From the binding energy 3114 and 1680 they could consider to be powerful and available antioxidant.
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Because disinfectants have been essential during the COVID-19 pandemic, the global demand for benzalkonium chlorides (BACs) has significantly increased. BACs can inactivate coronaviruses, but are known as toxic. In this study, we investigated the adsorption mechanisms of BAC12, BAC14, and BAC16 in water using powdered activated carbon (PAC). The effects of the reaction time, pH, and temperature on the adsorption kinetics of BACs were examined. The adsorption reaction followed pseudo-second-order kinetics, and better fitted to the Langmuir isotherm than the Freundlich isotherm. The best adsorption of BACs was achieved at neutral pH conditions. Thermodynamic analysis revealed that adsorption of BACs onto PAC is a spontaneous and endothermic process. Competitive adsorption experiments revealed that BACs with longer alkyl chains were adsorbed more effectively onto PAC than shorter alkyl chain BACs, implying that, while the electrostatic interaction is an important adsorption mechanism for BAC12, van der Waals interaction plays a more important role during the adsorption of BAC14 and BAC16. Finally, we observed the partial detoxification (69%) BAC in adsorption treated water with PAC using a Microtox test. © 2022 Korean Society of Environmental Engineers.
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Sustainability has become a significant concern worldwide, and Indonesia is no exception. In Indonesia, sustainable business practice has slowly arisen to conquer the global challenge. This paper highlights the need for a sustainable business model for the batik industry in Anugerah Batik Cooperative, Ciwaringin Village, Indonesia, by considering two factors, namely the utilization of natural dyeing in the batik process and the Covid-19 pandemic. Using a mix-method and business model canvas approach, the researchers interviewed nine owners of the sustainable batik industries and sent 109 questionnaires to the batik customers. The mix-method allowed the researchers to capture the existing business practice and gain insights from the batik customers' perception of sustainable batik products. A new perspective regarding the business model was developed by highlighting several building blocks, including value propositions, customer segments, customer relationships, essential resources, key activities, and revenue streams.
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Several protective coatings enhanced by antimicrobial agents and/or pigments were considered for the wooden toy market: water-based matte varnish, an ultra-hygiene water-based matte varnish (WBV-UH), a polyurethane matte varnish (PUV), and an ultra-hygiene antiviral polyurethane matte varnish (PUV-UH), as well as a water-based dye (WBV 5%K), an ultra-hygiene water-based dye (WBV-UH 5%K), a polyurethane dye (PUV 5%K), and an ultra-hygiene polyurethane dye (PUV-UH 5%K), which contain 5% red nano-pigment (K). By utilizing 7 kinds of bacteria and 2 types of yeast that are commonly detected in routine, daily settings, the efficacy of the different protective coatings on wooden toy surface was investigated. The antibacterial and antimicrobial activities of the tested dye samples were based on the agar-well diffusion method. Ultimately, the study found that the addition of antimicrobial agents to several different protective coatings and dyes resulted in the presence of antimicrobial activity vs. the lack thereof with protective coatings and dyes alone. Additionally, some of the dyes with added antimicrobial agents were found to be effective against biofilm formation. Overall, the addition of pigment into the coating, alongside the addition of antimicrobial agents, proved to be highly effective in inhibiting growth and spread of microorganisms on wooden toy surface.
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A novel cyanine 3 (Cy3)-based bio-conjugated sensor has been developed to detect target DNA or extracted RNA from COVID -19 samples using the fluorescence resonance energy transfer (FRET) experiment. A special sequence of the COVID -19 genome was selected as a complementary DNA (target DNA) part. The opposite chain of this target sequence was designed in 2 parts; one part was attached to the Cy3 organic dye (capture DNA or Cy3- DNA), and the other part was attached to the BHQ2 molecule (quencher DNA or BHQ2- DNA). The Cy3 molecule acts as a donor pair, and BHQ2 acts as an acceptor pair in the FRET experiment. The capture DNA and quencher DNA can form a sandwiched complex in the presence of target DNA. The formation of the entitled sandwiched hybrid causes the decrement of emission intensity of the Cy3 donor in bio-conjugated Cy3-DNA via energy transfer from Cy3 (as a donor) to BHQ2 (as an acceptor). Indeed, in the presence of non-complementary DNA, the pairing of DNA strands does not occur, the FRET phenomenon does not exist, and therefore fluorescence intensity of Cy3 does not decrease. Moreover, this biosensor was successfully applied to analyze real samples containing extracted RNA of COVID -19 prepared for the reverse transcriptase-polymerase chain reaction (RT-PCR) test, and the results were promising.
Subject(s)
COVID-19 , Fluorescence Resonance Energy Transfer , DNA/analysis , Fluorescence Resonance Energy Transfer/methods , Fluorescent Dyes , Humans , RNA , SARS-CoV-2/geneticsABSTRACT
In this work, we report structural and computational studies of a series of naphthalene-based bis-N-salicylidene aniline dyes, namely N,N′-bis-salicylidene-1,5-diaminonaphthalene (1), N,N′-bis(3-hydroxysalicylidene)-1,5-diaminonaphthalene (2) and N,N′-bis(3-methoxysalicylidene)-1,5-diaminonaphthalene (3). For 3, two polymorphs are known, namely 3red and 3yellow. Both polymorphs of 3 were analyzed and discussed. All the molecules adopt an enol-imine tautomer, stabilized by two intramolecular O–H⋯N hydrogen bonds. The structure of 2 is further stabilized by a couple of additional O–H⋯O hydrogen bonds and by intermolecular O–H⋯O interactions, yielding a 1D zig-zag supramolecular chain. Molecules of 2, 3red and 3yellow are interlinked through intermolecular C–H⋯π interactions, while the crystal packing of 1 and 2 is also described by intermolecular π⋯π interactions. More than 90% of the total Hirshfeld surface area for all the discussed molecules is occupied by H⋯H, H⋯C, H⋯O and C⋯C contacts. The polymorphs 3red and 3yellow, despite being chemically the same, differ geometrically, thus yielding remarkably different Hirshfeld surfaces. The Hirshfeld surface of 3yellow is very similar to that of 2. All structures are mainly characterized by the dispersion energy framework followed by the less significant electrostatic energy framework contribution. Molecular docking studies were employed to inspect the effect of 1–3 on the SARS-CoV-2 protein targets. The docking analysis revealed that the dye 2 showed the best binding energies toward Papain-like protease (PLpro, –10.40 kcal/mol), nonstructural protein 14 (nsp14 (N7-MTase), –10.10 kcal/mol), RdRp-RTP (–9.70 kcal/mol) and nonstructural protein 3 (nsp3_range 207-379-MES, –9.30 kcal/mol). The obtained results can give an insight into chemical and biological activities of the studied molecules that could aid in designing of potent reagents SARS-CoV-2.
ABSTRACT
Metal organic framework (MOF) hybrid materials could be one of the answers in this investigation. We describe a simple and effective encapsulation of doxorubicin (DOX), an anticancer drug, inside Zr-MOF, which have been little studied as drug delivery organizations. We investigated the measured release of the drug from Zr-MOF in response to external incentives such as pH changes and interaction with biomimetic schemes. Zr-MOF with encapsulated doxorubicin (DOX@Zr-MOF) can be manufactured in one pot by addition the anticancer medication DOX to the reaction combination. They demonstrated pH-responsive medication release and cancer cell killing capability. MOFs can be designed as multifunctional distribution vehicles for a diversity of loads, including medicinal and imaging agents, using our simple one-pot approach. Fourier transform infrared (FTIR), X-ray diffraction, scanning electron microscopy, and N-2 sorption isotherm were used to analyze MOF and the developed drug delivery (DOX@Zr-MOF) scheme. It investigated the effects of MOF and a bespoke drug delivery system on the feasibility of patient breast as well as liver tumor cell lines. At pH 5, the trapped drug can be released more quickly than at pH 7.4. Zr-MOF nanoparticles had modest cytotoxicity;however, DOX@Zr-MOF has higher cytotoxicity in MCF-7 and HepG-2 cells than DOX at concentrations greater than 31.25 mu g ml(-1). These results were discovered that DOX@Zr-MOF could be a promising technique for delivering medicines to cancer cells. Furthermore, using the agar well dispersion technique, Zr-MOF, DOX, and captured DOX@Zr-MOF samples were assessed for their potential antibacterial activity against pathogenic bacteria in comparison to traditional antibiotics. In compared to the reference medication Gentamycin, the DOX@Zr-MOF exhibits a large inhibitory zone against Gram negative organisms (Escherichia coli). The docking active place interactions were assessed to see if DOX might bind to the breast cancer 3hb5-oxidoreductase receptor, prostate cancer protein 2q7k, and SARS-CoV-2 protease 6YB7 for anticancer and anticovid-19 activities.
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Malignant peripheral nerve sheath tumors (MPNST) are aggressive sarcomas that account for approximately 5% of all soft tissue sarcomas. These tumors occur at an increased frequency in patients with the Neurofibromatosis Type 1 (NF1) cancer predisposition syndrome, but also occur sporadically or as a secondary complication of radiation therapy. In the setting of NF1, MPNST arise from malignant transformation of a benign precursor lesion, a plexiform neurofibroma. Initial treatment for MPNST typically involves surgery and radiation with or without chemotherapy. However, despite aggressive therapy, the recurrence rate is high and the vast majority of people with these cancers will die within 5 years of diagnosis. Treatment for metastatic disease is limited to cytotoxic chemotherapy and clinical trials. As such, there is a pressing need to identify novel therapeutic targets. Prior work from our laboratory identified TYK2 as a gene mutated in a subset of MPNSTs. More recently, we have shown that genetic knockdown of TYK2 in both human and murine MPNST cell lines results in decreased tumor growth and increased cell death in vitro. Additionally, genetic knockdown of Tyk2 in murine MPNST cells resulted in decreased tumor burden in subcutaneous tumors and metastatic tumor models. Immunohistochemistry (IHC) for TYK2 was performed on 27 MPNST and 16 plexiformneurofibromas to evaluate TYK2 association with tumor type, overall survival, metastasis and therapeutic response. Additionally, similar to genetic knockdown, pharmacologic inhibition of TYK2 dose-dependently decreased the percent cell confluence and induced apoptosis over time in four MPNST cell-lines, as assessed by IncuCyte proliferation and apoptosis assays. In murine MPNST JW23.3 cells, incubation with TYK2 inhibitors reduced pSTAT3 levels, but not pERK or pS6K.
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Owing to the COVID-19 pandemic, huge amounts of disposable face masks have been manufactured and used, and these discarded face masks have to be treated. In this study, we propose a simple approach for reusing the nonwoven polyester fabric (NWPF) from disposable face masks. In this approach, NWPF is utilized as a supporter for coating of a layer of graphene oxide/Fe3O4/chitosan (GFC) to form a GFC/NWPF adsorbent at room temperature via a simple spray coating method that does not require any solvent. The specific properties of GFC, NWPF, and the GFC/NWPF adsorbent were analysed via X-ray diffraction, transmission electron microscopy, ultraviolet-visible spectroscopy, vibrating sample magnetometry, and field-emission scanning electron microscopy. Results showed that the presence of NWPF enhanced the adsorption capacity of GFC towards organic dyes. At high concentrations of the organic dyes, the adsorption efficiency of the GFC/NWPF adsorbent to the dyes reached 100% within 24 h. The adsorption capacity (qmax) of the GFC/NWPF adsorbent to methylene blue, methyl orange, Congo red, and moderacid red was 54.795, 87.489, 88.573, and 29.010 mg g-1, respectively, which were considerably higher than that of bulk GFC (39.308, 82.304, 52.910, and 21.249 mg g-1, respectively). © 2022 Hoang V. Tran et al.
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Energy consumption and environmental pollution are major issues faced by the world. The present study introduces a single solution using SnS2 for these two major global problems. SnS2 nanoparticles and thin films were explored as an adsorbent to remove organic toxic materials (Rhodamine B (RhB)) from water and an alternative to the toxic cadmium sulfide (CdS) buffer for thin-film solar cells, respectively. Primary characterization tools such as X-ray photoelectron spectroscopy (XPS), Raman, X-ray diffraction (XRD), and UV-Vis-NIR spectroscopy were used to analyze the SnS2 nanoparticles and thin films. At a reaction time of 180 min, 0.4 g/L of SnS2 nanoparticles showed the highest adsorption capacity of 85% for RhB (10 ppm), indicating that SnS2 is an appropriate adsorbent. The fabricated Cu(In,Ga)Se2 (CIGS) device with SnS2 as a buffer showed a conversion efficiency (~5.1%) close to that (~7.5%) of a device fabricated with the conventional CdS buffer, suggesting that SnS2 has potential as an alternative buffer.
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We demonstrate that a conserved coronavirus spike protein peptide forms amyloid structures, differing from the native helical conformation and not predicted by amyloid aggregation algorithms. We investigate the conformation and aggregation of peptide RSAIEDLLFDKV, which is a sequence common to many animal and human coronavirus spike proteins. This sequence is part of a native alpha-helical S2 glycoprotein domain, close to and partly spanning the fusion sequence. This peptide aggregates into beta-sheet amyloid nanotape structures close to the calculated pI = 4.2, but forms disordered monomers at high and low pH. The beta-sheet conformation revealed by FTIR and circular dichroism (CD) spectroscopy leads to peptide nanotape structures, imaged using transmission electron microscopy (TEM) and probed by small-angle X-ray scattering (SAXS). The nanotapes comprise arginine-coated bilayers. A Congo red dye UV-vis assay is used to probe the aggregation of the peptide into amyloid structures, which enabled the determination of a critical aggregation concentration (CAC). This peptide also forms hydrogels under precisely defined conditions of pH and concentration, the rheological properties of which were probed. The observation of amyloid formation by a coronavirus spike has relevance to the stability of the spike protein conformation (or its destabilization via pH change), and the peptide may have potential utility as a functional material. Hydrogels formed by coronavirus peptides may also be of future interest in the development of slow-release systems, among other applications.
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In this communication, we describe five at-home laboratory experiments and demonstrations that complement a semester-long analytical chemistry curriculum. The experiments were successfully carried out by remote undergraduate students enrolled in a hybrid analytical chemistry course during the COVID19 pandemic. Students used their personal smartphones to perform the spectrophotometric analyses and all other materials needed to carry out the experiments were assembled in a homemade laboratory kit with a total cost of 265 USD (with the potential for additional cost savings). The experiments centered on the analysis of a single analyte, Allura Red food dye, and spanned quantitative analysis by absorption spectroscopy, reverse-phase liquid chromatography, fluorescence quenching, and Brownian motion. Students used external calibration and the method of standard additions to determine the concentration of Allura Red in maraschino cherry juice to be 140 +/- 40 and 130 +/- 40 ppm, respectively. Students' results were within the expected concentration range of 100-150 ppm. Qualitative spectroscopic and chromatographic analyses spurred robust discussion of the chemical principles underpinning the analytical techniques. Independent remote laboratory instruction was supported through weekly laboratory group meetings involving the remote students and course instructor. Group meetings enabled remote students to make connections with other students in the course, troubleshoot their data analysis in real-time with peer and instructor support, and reflect more deeply on their experimental work. Details about the kit contents, experimental results, best practices for implementation, and recommendations for future adaptation are described.
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Using molecular docking modeling, the noncovalent interaction of a large number of cyanine and squarylium dyes of various classes with SARS-CoV-2 coronavirus proteases has been studied. It has been found that electrostatic ligand-protein interactions (Coulomb interactions) can play an important role in the stability of noncovalent complexes. Based on the data obtained, the selection of dyes for further practical research has been carried out with the aim of developing spectral-fluorescent probes for detection of SARS-CoV-2. In addition, it is concluded that mesosubstituted thiacarbocyanines may be promising for use in photoinactivation of the coronavirus.
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The phenomenal global upheaval caused by SARS-CoV-2 has produced amazing responses from science and healthcare, particularly in the rapid realisation and production of vaccines. However, until early 2020 global infection control research was highly focused on rapidly increasing rates of conventional antimicrobial resistance (AMR) and the supply of drugs to counter this. Antimicrobial dyes have been suggested by various authors for inclusion in this effort, usually with little return from responsible authorities, and normally on the basis of post-treatment staining or potential toxicity, but this does not deny the fact that such dyes, particularly with photoactivation, are the only class of agents with pan-microbial activity - i.e. against each of bacteria, viruses, fungi and protozoa - regardless of the organism's drug resistance status. Conventional antibacterials, antivirals etc. usually demonstrate activity against one particular section of pathogens only, and disinfectants such as chlorhexidine or benzalkonium salts are too toxic for internal use. This perspective reflects both the background utility of antimicrobial dyes and ways forward for their inclusion in 21st Century infection control protocols.
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Antiviral action of various photosensitizers is already summarized in several comprehensive reviews, and various mechanisms have been proposed for it. However, a critical consideration of the matter of the area is complicated, since the exact mechanisms are very difficult to explore and clarify, and most publications are of an empirical and "phenomenological" nature, reporting a dependence of the antiviral action on illumination, or a correlation of activity with the photophysical properties of the substances. Of particular interest is substance-assisted photogeneration of highly reactive singlet oxygen (1O2). The damaging action of 1O2 on the lipids of the viral envelope can probably lead to a loss of the ability of the lipid bilayer of enveloped viruses to fuse with the lipid membrane of the host cell. Thus, lipid bilayer-affine 1O2 photosensitizers have prospects as broad-spectrum antivirals against enveloped viruses. In this short review, we want to point out the main types of antiviral photosensitizers with potential affinity to the lipid bilayer and summarize the data on new compounds over the past three years. Further understanding of the data in the field will spur a targeted search for substances with antiviral activity against enveloped viruses among photosensitizers able to bind to the lipid membranes.